Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 46
Filter
1.
Rev. argent. microbiol ; 53(3): 31-40, Sept. 2021.
Article in English | LILACS | ID: biblio-1376413

ABSTRACT

ABSTRACT Leptospirosis is an endemic disease caused byLeptospiraspp., a bacterium that affects animals and humans. In recent years, the number of reports of leptospirosis in wild animals has increased, which highlights the need to study the infectious agents in these animals. In this study, a duplex PCR for the detection of leptospiral DNA was performed on 50 kidney samples from bats, and a MAT (Microscopic Agglutination Test) for serological detection of anti-leptospiral antibodies was applied to 47 serum samples from bats from different regions of Buenos Aires Province, Argentina. DNA was extracted using Chelex-100 and duplex PCR was performed by targeting the detection of genessecYandflaB, of pathogenicLeptospiraspp. Of the 50 kidney samples, 3 were positive forEumopssp. andTadaridabrasiliensisby duplex PCR. Of the 47 serum samples, 12 were positive for different serovars:Leptospira interrogansserovars Icterohaemorrhagiae, Cynopteri and Bataviae, andLeptospira borgpeterseniiserovar Ballum. This is the first report of the detection of pathogenic leptospires by serology in bats belonging to theT. brasiliensisandEptesicus furinalisspecies in Argentina. In addition, this is the first report of the detection of pathogenic leptospiral DNA by PCR inT. brasiliensisspecies. The detection ofLeptospiraspp. in these wild animals shows that they may play an important role as wildlife reservoirs of leptospires.


RESUMEN La leptospirosis es una enfermedad endémica causada porLeptospiraspp., una bacteria que afecta a animales y a humanos. En los últimos años, el número de reportes de leptospirosis en animales silvestres ha aumentado, lo que resalta la necesidad de analizar los agentes infecciosos en estos animales. En este estudio, se aplicó una reacción en cadena de la polimerasa (PCR) dúplex para la identificación del ADN leptospiral en 50 muestras de riñones de murciélagos y la prueba de aglutinación microscópica (MAT) para la detección serológica de anticuerpos antileptospira en 47 muestras de suero de murciélagos de diferentes regiones de la provincia de Buenos Aires, Argentina. El ADN fue extraído usando Chelex-100 y la PCR dúplex estuvo dirigida a la detección de los genessecYyflaBdeLeptospiraspp. patógena. De las 50 muestras de riñón, tres resultaron positivas por PCR dúplex paraEumopssp. yTadaridabrasiliensis. De las 47 muestras de suero, 12 fueron positivas a diferentes serovares:LeptospirainterrogansserovaresIcterohaemorrhagiae, Cynopteri y Bataviae, yLeptospiraborgpeterseniiserovarBallum. Este es el primer reporte de detección de leptospiras patógenas por serología en murciélagos pertenecientes a las especiesT. brasiliensisyEptesicusfurinalisen Argentina. Además, también es el primero en la localización de ADN leptospiral por PCR en la especieT. brasiliensis.La identificación deLeptospiraspp. en estos animales silvestres muestra que pueden desempeñar un papel importante como reservorios de leptospiras en la fauna silvestre.


Subject(s)
Animals , Humans , Chiroptera , Leptospira , Leptospirosis , Argentina , Leptospira/genetics , Leptospirosis/veterinary , Leptospirosis/epidemiology
2.
Rev. Soc. Bras. Med. Trop ; 53: e20190333, 2020. graf
Article in English | LILACS | ID: biblio-1092187

ABSTRACT

Abstract INTRODUCTION: Phylogenetic analysis of the 16S ribosomal gene initial region is used to identify Leptospira isolates at the species level from clinical samples. Unfortunately, this method cannot differentiate between some intermediates and saprophytic species. METHODS: We used comparative genomic analysis between 35 Leptospira species to find new molecular targets for Leptospira species identification. RESULTS: We proposed the use of the rpoC gene, encoding the DNA-directed RNA polymerase β-subunit, for identifying 35 Leptospira species. CONCLUSIONS: The rpoC gene can be a molecular target to identify the main species of the Leptospira genus directly from clinical samples.


Subject(s)
Humans , Animals , DNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Leptospira/genetics , Phylogeny , DNA-Directed RNA Polymerases , Leptospira/classification
3.
Pesqui. vet. bras ; 39(4): 255-262, Apr. 2019. tab, graf
Article in English | VETINDEX, LILACS | ID: biblio-1002812

ABSTRACT

Canine leptospirosis is definitely diagnosed by demonstrating seroconversion in paired serum samples from the acute and convalescent period by the microagglutination test (MAT). However, the application of a polymerase chain reaction (PCR) assay can provide earlier confirmation of suspected cases. The objective of this study was to evaluate two PCR assays used in diagnosis of human leptospirosis (lipL32 real-time PCR and rrs conventional PCR) in cultured microorganisms and experimentally contaminated samples (whole blood, serum, urine), and investigate their applicability in clinical samples from dogs with presumptive diagnosis of leptospirosis by using the MAT as a reference. The analytical sensitivity of the lipL32 real-time PCR was 1 genome equivalent per reaction, whereas that for the rrs conventional PCR was 10 genome equivalents per reaction. Both assays amplified the pathogenic strains but were negative when evaluating the DNA of other microorganisms that may be present in clinical samples. The lipL32 real-time PCR detected 100 bacteria/mL in whole blood samples, 1000 bacteria/mL in serum samples and 10 bacteria/mL in urine samples, whereas the rrs conventional PCR detected 1000 bacteria/mL in whole blood and serum samples and 100 bacteria/mL in urine samples. Seven out of the 51 samples from dogs with presumptive diagnosis of leptospirosis were considered as confirmed cases. ThelipL32 real-time PCR detected positive results in six of the seven confirmed cases, whereas the rrs conventional PCR detected four. The PCR assays evaluated proved to be useful diagnostic tools in the confirmation of canine leptospirosis when used together with the MAT.(AU)


O diagnóstico definitivo da leptospirose canina é geralmente realizado demonstrando a seroconversão em amostras do paciente no período agudo e de convalescença por serologia. No entanto, a aplicação de técnicas de PCR pode contribuir para a confirmação de casos suspeitos num período de tempo mais curto. O objetivo deste estudo foi avaliar dois ensaios de PCR publicados em humanos (PCR-lipL32 em tempo real e PCR-rrs convencional) em culturas puras e em amostras de sangue com anticoagulante, soro e urina experimentalmente contaminados. Posteriormente, investigamos a utilidade de ambos os ensaios de PCR em amostras clínicas de cães com suspeita de leptospirose tomando a técnica de microaglutinação (MAT) como referência. A sensibilidade analítica foi de 1 e 10 genoma equivalente por reação para PCR-lipL32 em tempo real e para PCR-rrs convencional, respectivamente. Ambos os ensaios amplificaram corretamente as 14 estirpes patogênicas, mas foram negativos para avaliar o ADN de outros microrganismos que poderiam estar presentes em amostras clinicas. Em nas amostras experimentalmente contaminadas PCR-LipL32 em tempo real detectou 100 bactérias/mL em sangue total, 1000 bactérias/mL em soro e 10 bactérias/mL em urina. Enquanto o PCR-rrs convencional detectou 1000 bactérias/mL em sangue total e soro e 100 bactérias/mL na urina. Dos 51 cães suspeitos, sete foram considerados casos confirmados pela MAT. O PCR-lipL 32 em tempo real detectou seis dos sete casos confirmados, enquanto o PCR-rrs convencional foi positivo em quatro deles. As técnicas de PCR avaliadas provaram ser uma ferramenta de diagnóstico útil na confirmação de casos clínicos caninos quando utilizados em conjunto com a técnica MAT.(AU)


Subject(s)
Animals , Dogs , Polymerase Chain Reaction/methods , Polymerase Chain Reaction/veterinary , Leptospira/isolation & purification , Leptospira/genetics , Leptospirosis/diagnosis , Leptospirosis/microbiology , Leptospirosis/urine , Leptospirosis/blood , Argentina
4.
Braz. j. microbiol ; 49(4): 900-908, Oct.-Dec. 2018. tab, graf
Article in English | LILACS | ID: biblio-974290

ABSTRACT

ABSTRACT Matrix Assisted Laser Desorption/Ionization and Time of Flight mass spectrometry (MALDI-TOF MS) is a powerful tool for the identification of bacteria through the detection and analysis of their proteins or fragments derived from ribosomes. Slight sequence variations in conserved ribosomal proteins distinguish microorganisms at the subspecies and strain levels. Characterization of Leptospira spp. by 16S RNA sequencing is costly and time-consuming, and recent studies have shown that closely related species (e.g., Leptospira interrogans and Leptospira kirschneri) may not be discriminated using this technology. Herein, we report an in-house Leptospira reference spectra database using Leptospira reference strains that were validated with a collection of well-identified Brazilian isolates kept in the Bacterial Zoonosis Laboratory at the Veterinary Preventive Medicine and Animal Health Department at Sao Paulo University. In addition, L. interrogans and L. kirschneri were differentiated using an in-depth mass spectrometry analysis with ClinProTools™ software. In conclusion, our in-house reference spectra database has the necessary accuracy to differentiate pathogenic and non-pathogenic species and to distinguish L. interrogans and L. kirschneri.


Subject(s)
Humans , Bacterial Typing Techniques/methods , Tandem Mass Spectrometry/methods , Leptospira/isolation & purification , Leptospirosis/microbiology , Brazil , DNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Leptospira/classification , Leptospira/genetics , Leptospira/chemistry
5.
Braz. j. microbiol ; 49(4): 795-800, Oct.-Dec. 2018. tab, graf
Article in English | LILACS | ID: biblio-974314

ABSTRACT

ABSTRACT The objective of this study was to evaluate the occurrence of anti-Leptospira spp. antibodies in female buffalo in the state of Pernambuco. A total of 123 female buffalo blood samples were collected from five properties distributed in the state of Pernambuco. The microscopic agglutination test was used to study anti-Leptospira spp. antibodies. The occurrence of anti-Leptospira spp. antibodies was 28.5% (35/123; CI 20.7-37.3%) and on different properties, the occurrence ranged from 28.6% to 80.0%, with 100% of the properties showing animals with positive results. The serovars of the serogroup Sejroe with a higher incidence were Hardjoprajtino (CTG strain, 49.1%) and Hardjo (Prajtino genotype, 43.2%), followed by serogroup Grippotyphosa with the Grippotyphosa serovar (3.9%), serogroup Pomona with the Pomona serovar (1.9%), and the Icterohaemorrhagiae serovar Copenhageni (1.9%). This was the first record of the occurrence of anti-Lepstospira spp. antibodies in female buffalo in the state of Pernambuco. Control measures are necessary to prevent health and economic losses, given that the agent involved affects animal reproduction, triggering drops in conception rates or even clinical cases of abortion.


Subject(s)
Animals , Female , Cattle , Buffaloes/microbiology , Cattle Diseases/blood , Leptospira/immunology , Leptospirosis/veterinary , Antibodies, Bacterial/blood , Brazil , Agglutination Tests , Buffaloes/immunology , Cattle Diseases/immunology , Cattle Diseases/microbiology , Serogroup , Leptospira/isolation & purification , Leptospira/genetics , Leptospirosis/immunology , Leptospirosis/microbiology , Leptospirosis/blood , Antibodies, Bacterial/immunology
6.
Rev. argent. microbiol ; 50(3): 323-326, set. 2018. ilus
Article in English | LILACS | ID: biblio-977250

ABSTRACT

Ten Leptospira spp. strains were isolated from water samples from Nievas stream, Olavarría, Buenos Aires province (Argentina). The isolates showed the typical motility and morphology of the genus Leptospira under dark field microscopy, developing in liquid EMJH medium after eight days of incubation at 13 °C and 30 °C. All isolates were negative by the Multiple Locus Variable Number Tandem Repeat Analysis (MLVA). Molecular identification by 16S rRNA gene sequencing identified all isolates as nonpathogenic leptospires. Four isolates showed a genetic profile identical to that of the reference strain Leptospira biflexa serovar Patoc, and six isolates revealed sequence similarities within the 97-98% range, closely related to Leptospira yanagawae and Leptospira meyeri, respectively. Strains ScialfaASA42, ScialfaASA45, ScialfaASA44, ScialfaASA47, ScialfaASA49, ScialfaASA50 and ScialfaASA51 possibly represent a novel species of the genus Leptospira.


Se aislaron 10 cepas de Leptospira spp. a partir de muestras de agua del arroyo Nievas, partido de Olavarría (provincia de Buenos Aires, Argentina). Los aislamientos mostraron motilidad y morfología típica del género Leptospira bajo microscopía de campo oscuro y se desarrollaron en medio líquido EMJH después de 8 días de incubación a 13 y 30°C. Todos los aislamientos fueron negativos por MLVA, y mediante la secuenciación del gen 16S del ARNr se identificaron como leptospiras no patógenas. Cuatro de estos aislamientos mostraron un perfil genético idéntico a la cepa Leptospira biflexa serovar Patoc de referencia, en tanto que 6 de ellos presentaron similitudes de secuencias estrechamente relacionadas con las especies Leptospira yanagawae y Leptospira meyeri dentro del intervalo del 97 y 98%, respectivamente. Las cepas ScialfaASA42, ScialfaASA45, ScialfaASA44, ScialfaASA47, ScialfaASA49, ScialfaASA50 y ScialfaASA51 posiblemente representen una nueva especie del género Leptospira.


Subject(s)
Humans , Water Microbiology , Leptospira , Leptospirosis , Argentina , RNA, Ribosomal, 16S , Leptospira/isolation & purification , Leptospira/genetics
7.
Braz. j. microbiol ; 49(3): 584-590, July-Sept. 2018. tab
Article in English | LILACS | ID: biblio-951807

ABSTRACT

Abstract A modified TaqMan real-time polymerase chain reaction targeting a 138 bp fragment within the lipl32 gene was developed to identify exclusively pathogenic Leptospira spp. in dog urine samples. Thirty-five samples from dogs with suspected clinical leptospirosis and 116 samples from apparently healthy dogs were tested for presence of leptospiral DNA using the TaqMan-based assay. The results were compared with those from a well-established conventional PCR targeting the 16S RNA encoding gene associated with nucleotide sequencing analysis. The overall agreement between the assays was 94.8% (confidence interval [CI] 95% 88-100%). The newly developed assay presented 91.6% (CI 95% 71.5-98.5%) relative sensitivity (22[+] lipl32 PCR/24[+] 16S RNA and sequencing), 100% (CI 95% 96.3-100%) relative specificity and 98.7% accuracy (CI 95% 94.8-100%). The lipl32 assay was able to detect and quantify at least 10 genome equivalents/reaction. DNA extracted from 17 pathogenic Leptospira spp., 8 intermediate/saprophytic strains and 21 different pathogenic microorganisms were also tested using the lipl32 assay, resulting in amplification exclusively for pathogenic leptospiral strains. The results also demonstrated high intra and inter-assay reproducibility (coefficient of variation 1.50 and 1.12, respectively), thereby qualifying the newly developed assay as a highly sensitive, specific and reliable diagnostic tool for leptospiral infection in dogs using urine specimens.


Subject(s)
Animals , Dogs , Bacterial Outer Membrane Proteins/genetics , Urine/microbiology , Dog Diseases/diagnosis , Real-Time Polymerase Chain Reaction/methods , Leptospira/isolation & purification , Leptospirosis/veterinary , Lipoproteins/genetics , Bacterial Outer Membrane Proteins/urine , Sensitivity and Specificity , Dog Diseases/urine , Leptospira/genetics , Leptospirosis/diagnosis , Leptospirosis/microbiology , Leptospirosis/urine , Lipoproteins/urine
8.
Rev. Soc. Bras. Med. Trop ; 51(3): 364-367, Apr.-June 2018. tab
Article in English | LILACS | ID: biblio-1041463

ABSTRACT

Abstract INTRODUCTION: This study aimed to detect anti-Leptospira spp antibodies and Leptospira DNA in domestic dogs. METHODS: Blood and urine from 106 dogs were evaluated by microscopic agglutination test (MAT) and polymerase chain reaction (PCR), respectively. RESULTS: Six (5.7%) and one (1%) animals were positive by MAT and PCR, respectively. CONCLUSIONS: These results show a low prevalence of infection by Leptospira spp. The absence of positive results for the Icterohaemorrhagiae serogroup indicates the small relevance of these dogs as sources of human leptospirosis.


Subject(s)
Animals , Dogs , Agglutination Tests/veterinary , Polymerase Chain Reaction/veterinary , Dog Diseases/diagnosis , Leptospira/classification , Leptospirosis/veterinary , Brazil/epidemiology , Prevalence , Dog Diseases/microbiology , Dog Diseases/epidemiology , Leptospira/genetics , Leptospira/immunology , Leptospirosis/diagnosis , Leptospirosis/microbiology , Leptospirosis/epidemiology
9.
Rev. argent. microbiol ; 50(2): 126-130, jun. 2018. ilus
Article in Spanish | LILACS | ID: biblio-1041804

ABSTRACT

La leptospirosis es la zoonosis de mayor distribución mundial. El objetivo del preReacción en cadena sente trabajo fue desarrollar una técnica molecular que diferencie leptospiras patógenas. Se amplificó mediante PCR y se secuenció una región de la adhesina ligB, presente solo en las especies patógenas. Se utilizaron los iniciadores ligBFpet y ligBRpet. Dichos iniciadores lograron amplificar el ADN blanco de 6 cepas patógenas referenciales de Leptospira interrogans (serovar Pomona cepa Pomona, serovar Canicola cepa Hond Utrecht IV, serovar Copenhageni cepa M 20, serovar Wolffi cepa 3705, serovar Pyrogenes cepa Salinem y serovar Hardjo cepa Hardjoprajitmo) y el de Leptospira borgpetersenii serovar Castellonis cepa Castellon 3; también el de 4 cepas patógenas aisladas de bovino, porcino, rata y comadreja. En las 2 cepas referenciales no patógenas utilizadas, Leptospira biflexa serovar Patoc cepa Patoc i y L. biflexa serovar Andamana cepa Andamana, no hubo amplificación. La secuenciación de los productos amplificados expuso una suficiente variación entre los serovares estudiados, que permite diferenciarlos.


Leptospirosis is a zoonosis having worldwide distribution. The objective of this work was to develop a molecular technique to differentiate pathogenic Leptospira spp. A region of adhesin ligB, present only in the pathogenic species was amplified by PCR and sequenced. ligBRpet and ligBFpet primers were used, which amplified the target DNA from pathogenic L. interrogans reference strains serovars Pomona strain Pomona, Canicola strain Hond Utrecht IV, Copenhageni strain M 20, Wolffi strain 3705, Pyrogenes strain Salinem, Hardjo strain Hardjoprajitmo, L. borgpetersenii serovar Castellonis strain Castellon 3 and 4 pathogenic strains isolated from bovines, pigs, rats and opossums. L. biflexa serovars Patoc strain Patoc i and Andamana strain Andamana were not amplified. Sequencing of the amplified products exhibited sufficient variation among serovars, which differentiates them.


Subject(s)
Animals , Cattle , Rats , Polymerase Chain Reaction , Leptospira , Leptospirosis , Swine , Base Sequence , DNA Primers , Leptospira/genetics , Leptospira interrogans , Leptospirosis/diagnosis
10.
Mem. Inst. Oswaldo Cruz ; 113(2): 137-141, Feb. 2018. tab, graf
Article in English | LILACS | ID: biblio-894894

ABSTRACT

A previous study by our group reported the isolation and characterisation of Leptospira borgpetersenii serogroup Ballum strain 4E. This strain is of particular interest because it is highly virulent in the hamster model. In this study, we performed whole-genome shotgun genome sequencing of the strain using the SOLiD sequencing platform. By assembling and analysing the new genome, we were able to identify novel features that have been previously overlooked in genome annotations of other strains belonging to the same species.


Subject(s)
Animals , Guinea Pigs , Mice , Leptospira/classification , Leptospira/genetics , Leptospira/pathogenicity , Virulence
11.
Braz. j. microbiol ; 48(3): 483-488, July-Sept. 2017. tab, graf
Article in English | LILACS | ID: biblio-889131

ABSTRACT

Abstract Background: Leptospirosis is an infectious and acute disease caused by Leptospira spp. that have high epidemic potential. This study verified the main Leptospira spp. serovars detected by MAT from serum of patients with suspicion of leptospirosis from 2008 to 2012 in Minas Gerais State. Methods: The laboratory received sera from 4654 patients. All serum were screened by IgM-ELISA according to the manufacturer's instructions. Each sample reactive or indeterminate were tested against twenty-four serovars of Leptospira by MAT. Results: In this study, 597 patients were classified as reactive on MAT. Only 301 patients were confirmed by laboratory test. It was not possible confirmation by laboratory diagnosis of 296 patients. Among the samples classified as reactive on MAT, 273 patients exhibited titers bigger than 800 for one or more serovars; seroconversion was detected in 28 cases. Percentage of 85.1% of the samples reactive on MAT corresponded to males, 39.4% corresponded to patients aged between 20 and 39 years old. The most common serovars found were Icterohaemorrhagiae, Andamana, Patoc, Tarassovi, Copenhageni, Hardjo and Australis. Concerning the samples that exhibited titers bigger than 800, serovar Icterohaemorrhagiae was also the most common, followed by Copenhageni, Andamana, Patoc, Tarassovi, Grippotyphosa and Canicola. In this study, 40% of the cases occurred to the metropolitan area, state capital and 34 neighboring towns. Conclusion: Our results show the possibly spreading serovars in Minas Gerais State and contribute to knowledge of human leptospirosis, aiming at improving the prevention, control of the disease, as well as the treatment of infected patients.


Subject(s)
Humans , Male , Female , Adult , Young Adult , Leptospira/isolation & purification , Leptospirosis/epidemiology , Leptospirosis/microbiology , Antibodies, Bacterial/blood , Brazil/epidemiology , Leptospira/classification , Leptospira/genetics , Leptospira/immunology , Leptospirosis/blood , Leptospirosis/diagnosis
12.
Rev. Soc. Bras. Med. Trop ; 50(3): 396-398, May-June 2017. graf
Article in English | LILACS | ID: biblio-1041407

ABSTRACT

Abstract INTRODUCTION: Leptospirosis is an important health concern in Brazil. Currently, information on the epidemiology of the disease in the rural areas of the country is lacking. METHODS: Serological and molecular techniques were used to characterize a clinical isolate of Leptospira. RESULTS: The strain CLEP 00060, isolated from a 59-year-old man in a rural area of Rio Grande do Sul state, Brazil, was identified as belonging to L. kirschneri serogroup Pomona serovar Mozdok. CONCLUSIONS: This study contributes to the local epidemiological knowledge of leptospirosis, prevention of the disease by vaccines, and improvements in its diagnosis.


Subject(s)
Humans , Male , Leptospira/classification , Leptospirosis/microbiology , Phylogeny , Rural Population , Brazil , Agglutination Tests , Serotyping , Electrophoresis, Gel, Pulsed-Field , Multilocus Sequence Typing , Serogroup , Leptospira/genetics , Leptospira/immunology , Leptospirosis/diagnosis , Middle Aged
13.
Rev. Soc. Bras. Med. Trop ; 50(2): 239-242, Mar.-Apr. 2017. tab, graf
Article in English | LILACS | ID: biblio-1041406

ABSTRACT

Abstract INTRODUCTION: This study aimed to develop a duplex endpoint PCR assay for rapid detection and differentiation of Leptospira strains. METHODS: Primers were designed to target the rrs (LG1/LG2) and ligB (LP1/LP2) genes to confirm the presence of the Leptospira genus and the pathogenic species, respectively. RESULTS: The assay showed 100% specificity against 17 Leptospira strains with a limit of detection of 23.1pg/µl of leptospiral DNA and sensitivity of 103 leptospires/ml in both spiked urine and water. CONCLUSIONS: Our duplex endpoint PCR assay is suitable for rapid early detection of Leptospira with high sensitivity and specificity.


Subject(s)
DNA, Bacterial/isolation & purification , Polymerase Chain Reaction/methods , DNA Primers , Leptospira/classification , Species Specificity , Sensitivity and Specificity , Leptospira/isolation & purification , Leptospira/genetics
14.
Mem. Inst. Oswaldo Cruz ; 111(12): 737-744, Dec. 2016. tab, graf
Article in English | LILACS | ID: biblio-829253

ABSTRACT

The region of Antioquia in northeastern Colombia has the highest number of reported leptospirosis cases in the country. It also shows high seroprevalence indexes in the general population and socio-environmental conditions favourable for the transmission of the disease between humans and animals. In this study, 25 Leptospira isolates from Colombia’s Antioquia department were identified to the species level as L. santarosai (12), L. interrogans (9) and L. meyeri (4) using phylogenetic analysis of the Amidohydrolase gene. Typing at the serovar level was performed using multilocus sequence typing (MLST) and monoclonal antibodies. The serovars Canalzonae, Babudieri, Alice, Beye, and Copenhageni have been identified as causing human or animal infections in Antioquia, Colombia. The four environmental isolates were not identified to the serovar level. L. santarosai serovar Canalzonae and Alice were identified as new etiologic agents of human leptospirosis in Antioquia, Colombia. This paper reports species and serovars that were previously unknown in the region.


Subject(s)
Humans , Animals , Rats , Genetic Variation , Leptospira/classification , Bacterial Typing Techniques , Cebus , Colombia , Electrophoresis, Gel, Pulsed-Field , Genotype , Leptospira/genetics , Leptospira/isolation & purification , Multilocus Sequence Typing , Phylogeny , RNA, Ribosomal, 16S/genetics , Species Specificity
15.
Mem. Inst. Oswaldo Cruz ; 111(8): 539-541, Aug. 2016. tab, graf
Article in English | LILACS | ID: lil-789000

ABSTRACT

Leptospira kirschneri is one of the pathogenic species of the Leptospira genus. Human and animal infection from L. kirschneri gained further attention over the last few decades. Here we present the isolation and characterisation of Brazilian L. kirschneri serogroup Pomona serovar Mozdok strain M36/05 and the comparative genomic analysis with Brazilian human strain 61H. The M36/05 strain caused pulmonary hemorrhagic lesions in the hamster model, showing high virulence. The studied genomes presented high symmetrical identity and the in silico multilocus sequence typing analysis resulted in a new allelic profile (ST101) that so far has only been associated with the Brazilian L. kirschneri serogroup Pomona serovar Mozdok strains. Considering the environmental conditions and high genomic similarity observed between strains, we suggest the existence of a Brazilian L. kirschneri serogroup Pomona serovar Mozdok lineage that could represent a high public health risk; further studies are necessary to confirm the lineage significance and distribution.


Subject(s)
Animals , Rats , DNA, Bacterial/genetics , Genome, Bacterial/genetics , Leptospira/genetics , Cricetinae , Leptospira/pathogenicity , Multilocus Sequence Typing , Serogroup , Serotyping
16.
Mem. Inst. Oswaldo Cruz ; 110(4): 485-491, 09/06/2015. tab, graf
Article in English | LILACS | ID: lil-748871

ABSTRACT

Leptospirosis is a re-emerging zoonotic disease all over the world, important in tropical and subtropical areas. A majority of leptospirosis infected patients present as subclinical or mild disease while 5-10% may develop severe infection requiring hospitalisation and critical care. It is possible that several factors, such as the infecting serovar, level of leptospiraemia, host genetic factors and host immune response, may be important in predisposition towards severe disease. Different Leptospira strains circulate in different geographical regions contributing to variable disease severity. Therefore, it is important to investigate the circulating strains at geographical locations during each outbreak for epidemiological studies and to support the clinical management of the patients. In this study immunochromatography, microscopic agglutination test and polymerase chain reaction were used to diagnose leptospirosis. Further restriction fragment length polymorphism and DNA sequencing methods were used to identify the circulating strains in two selected geographical regions of Sri Lanka. Leptospira interrogans, Leptospira borgpetersenii and Leptospira kirschneri strains were identified to be circulating in western and southern provinces. L. interrogans was the predominant species circulating in western and southern provinces in 2013 and its presence was mainly associated with renal failure.


Subject(s)
Adolescent , Adult , Animals , Female , Humans , Male , Leptospira/genetics , Leptospirosis/microbiology , Agglutination Tests , Chromatography, Affinity , Leptospira interrogans , Leptospira/classification , Leptospira/isolation & purification , Leptospirosis/epidemiology , Polymerase Chain Reaction , Polymorphism, Genetic , Prospective Studies , Sequence Analysis, DNA , Severity of Illness Index , Species Specificity , Sri Lanka/epidemiology
17.
Braz. j. microbiol ; 46(2): 465-476, Apr-Jun/2015. tab, graf
Article in English | LILACS | ID: lil-749718

ABSTRACT

Leptospires are usually classified by methods based on DNA-DNA hybridization and the conventional cross-agglutination absorption test, which uses polyclonal antibodies against lipopolysaccharides. In this study, the amplification of the rpoB gene, which encodes the beta-subunit of RNA polymerase, was used as an alternative tool to identify Leptospira. DNA extracts from sixty-eight serovars were obtained, and the hypervariable region located between 1990 and 2500-bp in the rpoB gene was amplified by polymerase chain reaction (PCR). The 600-bp amplicons of the rpoB gene were digested with the restriction endonucleases TaqI, Tru1I, Sau3AI and MslI, and the restriction fragments were separated by 6% polyacrylamide gel electrophoresis. Thirty-five fragment patters were obtained from the combined data of restriction fragment length polymorphism (PCR-RFLP) analysis and used to infer the phylogenetic relationships among the Leptospira species and serovars. The species assignments obtained were in full agreement with the established taxonomic classifications. Twenty-two serovars were effectively identified based on differences in their molecular profiles. However, the other 46 serovars remained clustered in groups that included more than one serovar of different species. This study demonstrates the value of RFLP analysis of PCR-amplified rpoB as an initial method for identifying Leptospira species and serovars.


Subject(s)
DNA-Directed RNA Polymerases/genetics , Leptospira/classification , Leptospira/genetics , Molecular Diagnostic Techniques/methods , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Cluster Analysis , DNA Restriction Enzymes/metabolism , Electrophoresis, Polyacrylamide Gel , Genotype , Leptospira/isolation & purification , Molecular Sequence Data , Phylogeny , Sequence Analysis, DNA , Serogroup
18.
Rev. Soc. Bras. Med. Trop ; 48(3): 272-277, May-Jun/2015. tab, graf
Article in English | LILACS | ID: lil-749866

ABSTRACT

INTRODUCTION: Leptospirosis is a re-emerging zoonotic disease of humans and animals worldwide. The disease is caused by pathogenic species of the genus Leptospira. These organisms are maintained in nature via chronic renal infection of carrier animals, which excrete the organisms in their urine. Humans become infected through direct or indirect exposure to infected animals and their urine or through contact with contaminated water and soil. This study was conducted to investigate Leptospira infections as a re-emerging zoonosis that has been neglected in Egypt. METHODS: Samples from 1,250 animals (270 rats, 168 dogs, 625 cows, 26 buffaloes, 99 sheep, 14 horses, 26 donkeys and 22 camels), 175 human contacts and 45 water sources were collected from different governorates in Egypt. The samples were collected from different body sites and prepared for culture, PCR and the microscopic agglutination test (MAT). RESULTS: The isolation rates of Leptospira serovars were 6.9%, 11.3% and 1.1% for rats, dogs and cows, respectively, whereas the PCR results revealed respective detection rates of 24%, 11.3% and 1.1% for rats, dogs and cows. Neither the other examined animal species nor humans yielded positive results via these two techniques. Only six Leptospira serovars (Icterohaemorrhagiae, Pomona, Canicola, Grippotyphosa, Celledoni and Pyrogenes) could be isolated from rats, dogs and cows. Moreover, the seroprevalence of leptospiral antibodies among the examined humans determined using MAT was 49.7%. CONCLUSIONS: The obtained results revealed that rats, dogs and cows were the most important animal reservoirs for leptospirosis in Egypt, and the high seroprevalence among human contacts highlights the public health implications of this neglected zoonosis. .


Subject(s)
Animals , Cattle , Dogs , Humans , Rats , Disease Reservoirs/veterinary , Leptospirosis/epidemiology , Leptospirosis/veterinary , Zoonoses/epidemiology , Agglutination Tests/veterinary , Antibodies, Bacterial/blood , Buffaloes , Camelus , Communicable Diseases, Emerging , Disease Reservoirs/statistics & numerical data , Equidae , Egypt/epidemiology , Leptospira/genetics , Leptospira/immunology , Leptospirosis/diagnosis , Polymerase Chain Reaction , Prevalence , Seroepidemiologic Studies , Sheep , Zoonoses/microbiology
19.
Rev. Inst. Med. Trop. Säo Paulo ; 56(6): 473-476, Nov-Dec/2014. tab
Article in English | LILACS | ID: lil-725803

ABSTRACT

Introduction: Cart horses are a re-emerging population employed to carry recyclable material in cities. Methods: Sixty-two horses were sampled in an endemic area of human leptospirosis. The microscopic agglutination test (MAT) and real-time polymerase chain reaction (qPCR) were performed. Results: A seropositivity of 75.8% with serovar Icterohaemorrhagiae in 80.8% of the horses was observed. Blood and urine were qPCR negative. MAT showed positive correlations with rainfall (p = 0.02) and flooding (p = 0.03). Conclusions: Although horses may be constantly exposed to Leptospira spp. in the environment mostly because of rainfall and flooding, no leptospiremia or leptospiruria were observed in this study.


Introdução: Cavalos carroceiros são uma população reemergente empregada para transportar materiais recicláveis em cidades. Métodos: Em área endêmica para leptospirose humana foram amostrados 62 cavalos. Soroaglutinação microscópica e reação em cadeia da polimerase em tempo real foram empregadas. Resultados: Observou-se soropositividade em 75,8% com sorovar Icterohaemorrhagiae em 80,8% cavalos. Amostras de sangue e urina foram negativas no qPCR. Observou-se correlação positiva entre SAM e pluviosidade (p = 0,02) e alagamentos (p = 0,03). Conclusão: Embora cavalos possam estar constantemente expostos a Leptospira spp. no ambiente, principalmente por chuvas e inundações, leptospiremia e leptospiruria não foram encontradas neste estudo.


Subject(s)
Animals , Humans , Antibodies, Bacterial/blood , Horse Diseases/epidemiology , Leptospira , Leptospirosis/veterinary , Agglutination Tests/veterinary , Brazil/epidemiology , Horses , Horse Diseases/diagnosis , Leptospira/genetics , Leptospira/immunology , Leptospirosis/diagnosis , Leptospirosis/epidemiology , Real-Time Polymerase Chain Reaction/veterinary , Seroepidemiologic Studies , Urban Population
20.
Braz. j. microbiol ; 45(4): 1527-1530, Oct.-Dec. 2014. ilus
Article in English | LILACS | ID: lil-741309

ABSTRACT

Two Leptospira sp. isolates were obtained by the first time from goats in Brazil and characterized by sequencing rrs, rpoB and secY genes, PFGE and typing with monoclonal antibodies. Both isolates are identical and belong to Leptospira santarosai. Analysis of the rrs and the rpoB genes sequences revealed 100% identity between the goat isolates and the Bananal reference strain. When secY sequences of the two isolates were compared to each other, it was observed that they had identical sequences. However, when compared to that of the Bananal reference strain, there were 15 mismatches along the 549 bp secY sequence. In conclusion, molecular methods are increasingly useful for the characterization of leptospires and allowed to identify those isolates of caprine origin as closely related but not identical to serovar Bananal, and constitute a new type named Carioca.


Subject(s)
Animals , Asymptomatic Infections , Leptospira/isolation & purification , Leptospirosis/veterinary , Base Sequence , Brazil , Bacterial Proteins/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , DNA-Directed RNA Polymerases/genetics , Goats , Leptospira/classification , Leptospira/genetics , Leptospirosis/microbiology , Molecular Sequence Data , Sequence Analysis, DNA , Sequence Homology
SELECTION OF CITATIONS
SEARCH DETAIL